Chi Yuan

Department of Computer Science, Hohai University

prof_pic.jpg

Qinxue Building 4123

Hohai University Jiangning District, Nanjing

I am currently a lecturer in College of Computer and Information at Hohai University, China. I completed my PhD in CS from Nanjing University of Science and Technology. I had also spent 2 years time working as Research Staff at Columbia Univerisity. My research is at the intersection of Computer Science and Medicine.

I was also a funder of the Teexer Inc, developing softwares for self-service machine.

My research interests are mainly in biomedical natural language processing, health informatics and knowledge engineering.

Besides doing research, I spend time with Penn. Also, I look into hacking related techniques (e.g. RFID hacking and cloning, Man-in-the-middle attack).

Opening for research assistant and graduate student

news

Apr 15, 2021 Joined Hohai University :smile:

selected publications

  1. JAMIA
    From clinical trials to clinical practice: How long are drugs tested and then used by patients?
    Yuan, Chi, Ryan, Patrick B, Ta, Casey N, Kim, Jae Hyun, Li, Ziran, and Weng, Chunhua
    Journal of the American Medical Informatics Association 2021
  2. J B I
    A knowledge base of clinical trial eligibility criteria
    Liu, Hao,  Yuan, Chi, Butler, Alex, Sun, Yingcheng, and Weng, Chunhua
    Journal of Biomedical Informatics 2021
  3. JAMIA
    Criteria2Query: a natural language interface to clinical databases for cohort definition
    Yuan, Chi, Ryan, Patrick B, Ta, Casey, Guo, Yixuan, Li, Ziran, Hardin, Jill, Makadia, Rupa, Jin, Peng, Shang, Ning, Kang, Tian, and others,
    Journal of the American Medical Informatics Association 2019
    HTML
  4. JAMIA
    A graph-based method for reconstructing entities from coordination ellipsis in medical text
    Yuan, Chi, Wang, Yongli, Shang, Ning, Li, Ziran, Zhao, Ruxin, and Weng, Chunhua
    Journal of the American Medical Informatics Association 2020
  5. Sci Data
    Chia, a large annotated corpus of clinical trial eligibility criteria
    Kury, Fabrı́cio, Butler, Alex,  Yuan, Chi, Fu, Li-heng, Sun, Yingcheng, Liu, Hao, Sim, Ida, Carini, Simona, and Weng, Chunhua
    Scientific data 2020

Teaching

0601547    Algorithm Design and Analysis    2021 fall semester

0604510    Artificial Intelligence    2021 spring semester